I have gene sequence file with the format is ".fastq". How can I impout fastq file in to sas for data dealing? Thanks.
R is integrated with SAS IML so you should be able to use
http://svitsrv25.epfl.ch/R-doc/library/ShortRead/html/readFastq.html
It looks like it's a text file,so you can use standard text processing. That being said, it also looks like a complex file.
If you need assistance, its best to post a sample of the file, attach it as a .txt file or post in the message.
Thanks I will try. Actually I used Enterprise Guide to import, and then copy the code to sas to get data set.
R is integrated with SAS IML so you should be able to use
http://svitsrv25.epfl.ch/R-doc/library/ShortRead/html/readFastq.html
Thanks.
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