Hello @Anita_n . Sorry I wasn't able to reply. I have a paper submitted to PharmaSUG next year that if accepted will walk through how I make both a Sankey diagram and a Sunburst chart in more detail. My current iteration of these programs looks like the following (note this is run on bogus random data):
The counts are added to each node and the connecting lines can either be the group they come from, the group they go to or split half and half. The paths can be either set to groups or outline each patient moving. The outlining doesn't work as well unless more points are allowed:
Something that has been more popular than the Sankey here has been the Sunburst chart. This allows you to start in the middle and follow exact paths that patients follow whereas in the Sankey the patients become muddled within each node so specific patients cannot be followed (unless coloring each bar for a patient specifically I suppose, but that is a lot of colors/patterns):
I have macros for both of these and if my paper is accepted I will be sharing the techniques and macros on a community page. If you are interested in trying one of the macros please feel free to e-mail me jpmeyers.spa@gmail.com
@JeffMeyers I am very anxious to know how you labelled the segments of the plot as shown here.
Could you please use your code to illustrate this? I guess the values are the frequencies of each cycle:
data random;
call streaminit(123);
do id = 1 to 100;
do cycle=1 to 5;
u = rand("Uniform");
grade = floor(6*u);
output;
if grade=5 then cycle=5;
end;
end;
drop u:;
label cycle='Cycle' grade='Maximum Grade AE';
run;
option mprint;
%macro sankey(
/*Required*/
data= /*Dataset to input*/,
id= /*Patient/traveler ID*/,
nodes= /*Nodes are the different points or time-points that the curves connect between. Needs to be numeric*/,
group= /*Different subgroups for the node sections*/,
/*Optional for tweaking the graph*/
barwidth=5 /*Controls width of the Nodes*/,
bargap=5 /*Allocates a percentage of the y-space for gaps between GROUPs*/,
points=20 /*Number of points used to draw Bezier curves. More=smoother lines but more memory*/,
curve_rectangle_gap=0 /*Gap as a percentage between the ends of the connecting curves and the Nodes*/,
antialias=200000 /*When a lot of points are used antialias will need to be increased to get smooth curves*/,
width=16in /*Determines the width of the image*/,
height=8in /*Determines the height of the image*/,
plotname=_sankey /*Determines the name of the image. ODS LISTING should be turned on to save image*/,
font_size=12pt /*Determines the font size*/);
/**Rename Variables and create a temporary dataset**/
data _temp;
merge &data (keep=&id rename=(&id=id))
&data (keep=&nodes rename=(&nodes=nodes))
&data (keep=&group rename=(&group=group));
run;
/**Grab Labels for Group and Nodes variables**/
data _null_;
set _temp (obs=1);
%local group_label nodes_label;
call symput('nodes_label',strip(vlabel(nodes)));
call symput('group_label',strip(vlabel(group)));
run;
/**Grab cross tab frequency of groups and nodes for rectangles**/
proc freq data=_temp noprint;
table nodes*group / outpct out=_frq (keep=nodes group count pct_row);
run;
/**Assign a group level value for use in arrays later**/
data _levels;
set _frq;
by nodes group;
if first.nodes then group_lvl=0;
group_lvl+1;
run;
/**Grab number and values of unique Node values**/
proc sql noprint;
%local n_nodes i null;
select count(distinct nodes) into :n_nodes separated by ''
from _frq;
select distinct nodes format=12. into :node1-
from _frq;
%do i = 1 %to &n_nodes;
%local n_group&i ;
%end;
/**Count how many groups are in each Node**/
select nodes,count(distinct group) into :null,:n_group1-
from _frq group by nodes;
quit;
/*Create coordinates for rectangles**/
/*BARWIDTH controls the width of rectangles, BARGAP assigns a percentage for white space*/
data _rectangles;
set _frq;
by nodes group;
array _node_n {&n_nodes}
(%do i = 1 %to &n_nodes;
%if &i>1 %then %do; , %end;
&&n_group&i
%end;);
if first.nodes then do;
last_y=0;nodes_count+1;group_count=0;
end;
if first.group then do;
last_x=100*(nodes_count-1)/(&n_nodes-1);
group_count+1;
end;
retain last_x last_y;
rectangle_id=catx('-',nodes_count,group_count);
x=last_x;y=last_y;output;
x=last_x+&barwidth;y=last_y;output;
x=last_x+&barwidth;y=last_y+((100-&bargap)/100)*pct_row;output;
x=last_x;y=last_y+((100-&bargap)/100)*pct_row;output;
last_y=y+&bargap/_node_n(nodes_count);
drop _node:;
run;
/*Find the unique paths going out of each node between groups*/
proc sort data=_temp;
by id;
data _paths;
set _temp;
by id;
array node_ {&n_nodes};
retain node_;
if first.id then call missing(of node_(*));
%do i=1 %to &n_nodes;
%if &i>1 %then %do; else %end;
if nodes=&&node&i then node_lvl=&i;
%end;
node_(node_lvl)=group;
if last.id then do;
do i=1 to dim(node_)-1;
if ^missing(node_(i)) then do;
start=node_(i);
starting_node=i;
do j = i+1 to dim(node_);
if ^missing(node_(j)) then do;
end=node_(j);
ending_node=j;
output;
j=dim(node_);
end;
end;
end;
end;
end;
keep id start starting_node end ending_node node_:;
run;
/**Get counts for each path**/
proc sort data=_paths;
by starting_node ending_node start end;
run;
proc freq data=_paths noprint;
by starting_node ending_node;
table start*end / list missing out=_frq2;
run;
/**Grab counts and values needed to create the Connecting Curves**/
proc sql noprint;
create table _paths2 as
select
/**Numbers for starting groups**/
a.starting_node,a.start,c.count as start_group_n,
/*Grab location and height of rectangles*/
c2.y_min as start_group_min,c2.y_max as start_group_max,c2.y_max-c2.y_min as start_group_diff,c2.x_max+&curve_rectangle_gap as start_group_x,
c3.group_lvl as start_index, /*Used for arrays*/
/**Numbers for ending groups**/
a.ending_node,a.end,e.count as end_group_n,
/*Grab location and height of rectangles*/
e2.y_min as end_group_min,e2.y_max as end_group_max,e2.y_max-e2.y_min as end_group_diff,e2.x_min-&curve_rectangle_gap as end_group_x,
e3.group_lvl as end_index,/*Used for arrays*/
a.count as n_move /*Number of patients in the current path*/
from _frq2 a
left join _frq c on a.starting_node=c.nodes and a.start=c.group
left join _frq e on a.ending_node=e.nodes and a.end=e.group
left join (select nodes,group,min(y) as y_min,max(y) as y_max, max(x) as x_max
from _rectangles group by nodes,group) as c2
on a.starting_node=c2.nodes and a.start=c2.group
left join (select nodes,group,min(y) as y_min,max(y) as y_max,min(x) as x_min
from _rectangles group by nodes,group) as e2
on a.ending_node=e2.nodes and a.end=e2.group
left join _levels c3 on a.starting_node=c3.nodes and a.start=c3.group
left join _levels e3 on a.ending_node=e3.nodes and a.end=e3.group
order by starting_node,ending_node,start,end;
/**Grab number of distinct group values for array**/
%local n_grps;
select count(distinct end) into :n_grps separated by ''
from _paths2;
/**Grab x-axis location for node labels**/
create table _node_labels as
select nodes, (max(x)+min(x))/2 as x_label from _rectangles group by nodes;
quit;
data _paths3;
set _paths2;
by starting_node ending_node start end;
/**Hold running totals for group counts**/
array start_n {&n_nodes,&n_grps} (%sysevalf(&n_nodes*&n_grps)*0) ;
array end_n {&n_nodes,&n_grps} (%sysevalf(&n_nodes*&n_grps)*0) ;
/***Build the Bezier Curve Connectors: Use Cubic Bezier Equation:
B(t)=(1-t)^3*P0 + 3(1-t)^2*t*P1 + 3(1-t)*t^2*P2 + t^3*P3, 0 <= t <= 1***/
length path_index $20.;
path_index=catx('-',starting_node,start_index,end_index);
/*Find y-axis values for start/end corners of Bezier curves*/
start_y1=start_group_min+start_group_diff*(start_n(starting_node,start_index)/start_group_n);
start_y2=start_y1+start_group_diff*(n_move/start_group_n);
end_y1=end_group_min+end_group_diff*(end_n(ending_node,end_index)/end_group_n)+end_group_diff*(n_move/end_group_n);
end_y2=end_y1-end_group_diff*(n_move/end_group_n);
/**Bezier Curve 1: From Left group to Right Group path**/
do t = 0 to 1 by 1/25;
x=((1-t)**3)*start_group_x+
3*((1-t)**2)*t*(start_group_x+(end_group_x-start_group_x)/3)+
3*(1-t)*(t**2)*(start_group_x+2*(end_group_x-start_group_x)/3)+
(t**3)*end_group_x;
y=((1-t)**3)*start_y2+3*((1-t)**2)*t*start_y2+3*(1-t)*(t**2)*end_y1+(t**3)*end_y1;
output;
end;
/**Bezier Curve 2: From Right Group back to Left Group**/
do t = 0 to 1 by 1/25;
x=((1-t)**3)*end_group_x+
3*((1-t)**2)*t*(start_group_x+2*(end_group_x-start_group_x)/3)+
3*(1-t)*(t**2)*(start_group_x+(end_group_x-start_group_x)/3)+
(t**3)*start_group_x;
y=((1-t)**3)*end_y2+3*((1-t)**2)*t*end_y2+3*(1-t)*(t**2)*start_y1+(t**3)*start_y1;
output;
end;
/**Increase running total for each groups N**/
start_n(starting_node,start_index)+n_move;
end_n(ending_node,end_index)+n_move;
keep x y path_index start;
run;
/**Combine Data for Plot**/
data _plot;
set _rectangles (keep=x y rectangle_id group rename=(rectangle_id=id))
_paths3 (keep=x y path_index start rename=(path_index=id start=group))
_node_labels;
run;
ods graphics /reset width=&width height=&height ANTIALIASMAX=&antialias imagename="&plotname";
proc sgplot data=_plot noborder;
polygon x=x y=y id=id / fill nooutline group=group transparency=0.3 name='p';
xaxistable nodes / x=x_label location=inside position=top nolabel title="&nodes_label" valueattrs=(size=&font_size) titleattrs=(size=&font_size) ;
xaxis min=0 max=%sysevalf(100+&barwidth) values=(0 to 100 by 10) display=none valueshint;
yaxis min=0 max=100 reverse values=(0 to 100 by 10) display=none;
keylegend 'p'/ title="&group_label" noborder location=outside position=bottom exclude=('') valueattrs=(size=&font_size) titleattrs=(size=&font_size);
run;
%mend;
%sankey(data=random,group=grade,id=id,nodes=cycle);
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