I have gene sequence file with the format is ".fastq". How can I impout fastq file in to sas for data dealing? Thanks.
R is integrated with SAS IML so you should be able to use
http://svitsrv25.epfl.ch/R-doc/library/ShortRead/html/readFastq.html
It looks like it's a text file,so you can use standard text processing. That being said, it also looks like a complex file.
If you need assistance, its best to post a sample of the file, attach it as a .txt file or post in the message.
Thanks I will try. Actually I used Enterprise Guide to import, and then copy the code to sas to get data set.
R is integrated with SAS IML so you should be able to use
http://svitsrv25.epfl.ch/R-doc/library/ShortRead/html/readFastq.html
Thanks.
Available on demand!
Missed SAS Innovate Las Vegas? Watch all the action for free! View the keynotes, general sessions and 22 breakouts on demand.
Learn how use the CAT functions in SAS to join values from multiple variables into a single value.
Find more tutorials on the SAS Users YouTube channel.