Programming the statistical procedures from SAS

R^2 Command for finding LD HELP!

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New Contributor
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R^2 Command for finding LD HELP!

How can I find R^2 in Output when I'm calculating LD?

Can someone help me with the commands?

Thanks!
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Re: R^2 Command for finding LD HELP!

LD?
New Contributor
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Re: R^2 Command for finding LD HELP!

Linkage Disequilibrium.....

Hope it helps.... Message was edited by: TA-9ff
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Re: R^2 Command for finding LD HELP!

what procedure(s) are you using OR post your code?
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Re: R^2 Command for finding LD HELP!

Add the CORRCOEF option to the PROC ALLELE statement. The statistic produced is R, not R^2. See Example 3.2: Computing Linkage Disequilibrium Measures for SNP Data of the ALLELE procedure documentation.

Dale
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