BookmarkSubscribeRSS Feed
TA_9ff
Calcite | Level 5
How can I find R^2 in Output when I'm calculating LD?

Can someone help me with the commands?

Thanks!
4 REPLIES 4
TA_9ff
Calcite | Level 5
Linkage Disequilibrium.....

Hope it helps.... Message was edited by: TA-9ff
deleted_user
Not applicable
what procedure(s) are you using OR post your code?
Dale
Pyrite | Level 9
Add the CORRCOEF option to the PROC ALLELE statement. The statistic produced is R, not R^2. See Example 3.2: Computing Linkage Disequilibrium Measures for SNP Data of the ALLELE procedure documentation.

Dale

sas-innovate-2024.png

Join us for SAS Innovate April 16-19 at the Aria in Las Vegas. Bring the team and save big with our group pricing for a limited time only.

Pre-conference courses and tutorials are filling up fast and are always a sellout. Register today to reserve your seat.

 

Register now!

What is ANOVA?

ANOVA, or Analysis Of Variance, is used to compare the averages or means of two or more populations to better understand how they differ. Watch this tutorial for more.

Find more tutorials on the SAS Users YouTube channel.

Discussion stats
  • 4 replies
  • 1244 views
  • 0 likes
  • 3 in conversation