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sas_learnsups
Obsidian | Level 7

I have following set of statements in sql that i would like to run through SAS odbc connection in SQL server and create a report on data completeness of the tables present at our end

/**************************************************************************************/

SET NOCOUNT ON
DECLARE @Schema NVARCHAR(100) = 'EMR'
DECLARE @Table NVARCHAR(100) = 'eMR_Assessment'
DECLARE @SQL NVARCHAR(MAX) =''
IF OBJECT_ID ('EMR.eMR_Assessment_dchek') IS NOT NULL DROP TABLE EMR.eMR_Assessment_dchek

 

CREATE TABLE EMR.eMR_Assessment_dchek (TableName sysname, ColumnName sysname , ColumnPosition int ,NullCount int , NonNullCount int, TotalCount int, NotNullpercentage decimal(20,2))

SELECT @SQL += 'SELECT '''+TABLE_NAME+''' AS TableName , '''+COLUMN_NAME+''' AS ColumnName, '''+CONVERT(VARCHAR(5),ORDINAL_POSITION)+''' AS ColumnPosition,
SUM(CASE WHEN '+COLUMN_NAME+' IS NULL THEN 1 ELSE 0 END) CountNulls , COUNT(' +COLUMN_NAME+') CountnonNulls, count(*) TotalCount,
(cast(COUNT(' +COLUMN_NAME+') as decimal (20,2))/ cast(count(*) as decimal (20,2)))*100 NotNullpercentage
FROM '+QUOTENAME(TABLE_SCHEMA)+'.'+QUOTENAME(TABLE_NAME)+';'+ CHAR(10)
FROM INFORMATION_SCHEMA.COLUMNS
WHERE TABLE_SCHEMA = @Schema
AND TABLE_NAME = @table

 

INSERT INTO EMR.eMR_Assessment_dchek
EXEC sp_executesql @SQL

SELECT *
FROM EMR.eMR_Assessment_dchek

/***************************************************************************************/

 

 

I have incorporated above query in to sas execute statements 

 

/********************************************************************************/


proc sql;
connect to odbc(dsn=ambo);
execute (SET ANSI_NULLS ON)by odbc;
execute (SET QUOTED_IDENTIFIER ON)by odbc;
execute (SET ANSI_PADDING ON)by odbc;
execute (
SET NOCOUNT ON
DECLARE @Schema NVARCHAR(100) = 'EMR'
DECLARE @Table NVARCHAR(100) = 'eMR_Assessment'
DECLARE @SQL NVARCHAR(MAX) =''
IF OBJECT_ID ('EMR.eMR_Assessment_dchek') IS NOT NULL DROP TABLE EMR.eMR_Assessment_dchek
)by odbc;
execute (
CREATE TABLE EMR.eMR_Assessment_dchek (TableName sysname, ColumnName sysname , ColumnPosition int ,NullCount int , NonNullCount int, TotalCount int, NotNullpercentage decimal(20,2))
)by odbc;
execute (
SELECT @SQL += 'SELECT '''+TABLE_NAME+''' AS TableName , '''+COLUMN_NAME+''' AS ColumnName, '''+CONVERT(VARCHAR(5),ORDINAL_POSITION)+''' AS ColumnPosition,
SUM(CASE WHEN '+COLUMN_NAME+' IS NULL THEN 1 ELSE 0 END) CountNulls , COUNT(' +COLUMN_NAME+') CountnonNulls, count(*) TotalCount,
(cast(COUNT(' +COLUMN_NAME+') as decimal (20,2))/ cast(count(*) as decimal (20,2)))*100 NotNullpercentage
FROM '+QUOTENAME(TABLE_SCHEMA)+'.'+QUOTENAME(TABLE_NAME)+';'+ CHAR(10)
FROM INFORMATION_SCHEMA.COLUMNS
WHERE TABLE_SCHEMA = @Schema
AND TABLE_NAME = @table
)by odbc;

execute (SET ANSI_PADDING OFF)by odbc; quit;
execute ( INSERT INTO EMR.eMR_Assessment_dchek
EXEC sp_executesql @SQL

)by odbc;
execute ( SELECT *
FROM EMR.eMR_Assessment_dchek
)by odbc;
quit;

/*********************************************************************************************/

 

But I am getting following error in SAS EG:

ERROR: CLI execute error: [Microsoft][ODBC SQL Server Driver][SQL Server]Must declare the scalar variable "@sql".
NOTE: PROC SQL set option NOEXEC and will continue to check the syntax of statements.

 execute (SET ANSI_PADDING OFF)by odbc;

NOTE: Statement not executed due to NOEXEC option.
 quit;
NOTE: The SAS System stopped processing this step because of errors.

 

Whats possibly going wrong!

1 ACCEPTED SOLUTION

Accepted Solutions
Tom
Super User Tom
Super User

It looks like that complex code is just trying to generate code from data.

Do you know what code it is trying to generate?

Do you know what data it is using to generate the code?
Do you have access to the data it is using to generate the code?

If you can answer those then you use SAS to generate the code instead and your process will be much easier.

 

Let's see if we can translate that SQL server dialect into normal code.

First it appears to be setting two constants and creating a place to store the code:

DECLARE @Schema NVARCHAR(100) = 'EMR'
DECLARE @Table NVARCHAR(100) = 'eMR_Assessment'
DECLARE @SQL NVARCHAR(MAX) =''

So in SAS you might use macro variables for that. So something like:

%let Schema= 'EMR' ;
%let Table= 'eMR_Assessment' ;
%let SQL=;

Then it seems to be querying this table:

FROM INFORMATION_SCHEMA.COLUMNS
WHERE TABLE_SCHEMA = @Schema
AND TABLE_NAME = @table

Now lets see if we can figure out what code it is trying to generate from that data.

SELECT @SQL += 
'SELECT '''
+TABLE_NAME
+''' AS TableName , '''
+COLUMN_NAME
+''' AS ColumnName, '''
+CONVERT(VARCHAR(5),ORDINAL_POSITION)
+''' AS ColumnPosition,SUM(CASE WHEN '
+COLUMN_NAME
+' IS NULL THEN 1 ELSE 0 END) CountNulls , COUNT(' 
+COLUMN_NAME
+') CountnonNulls, count(*) TotalCount,(cast(COUNT(' 
+COLUMN_NAME
+') as decimal (20,2))/ cast(count(*) as decimal (20,2)))*100 NotNullpercentage FROM '
+QUOTENAME(TABLE_SCHEMA)
+'.'
+QUOTENAME(TABLE_NAME)
+';'
+ CHAR(10)

Looks like it is trying to generate a series of SELECT statements separated by semi-colon and linefeed.

Looks like it is expecting to find variables named: 

TABLE_NAME
COLUMN_NAME
ORDINAL_POSITION
TABLE_SCHEMA

In that INFORMATION_SCHEMA.COLUMNS table.

 

Based on the names of the resulting columns it appears that it is trying to generate code to process every variable in a table and figure out how often the value is missing. 

 

You could easily do that in SAS.  For example here is one way.

Get the list of variables. Use it to generate some SQL code to find the counts you need. Transpose it to get it from one observation for the dataset to one observation per variable. Calculate the percentage.

proc contents data=sashelp.demographics noprint out=contents; run;
proc sort; by varnum; run;
filename code temp;
data _null_ ;
 file code ;
 if _n_=1 then put 'create table summary as select count(*) as nobs' ;
 set contents end=eof;
 put ',count(' name ') as ' name ;
 if eof then put 'from ' libname +(-1) '.' memname ';' ;
run;

proc sql;
%include code / source2;
quit;

proc transpose data=summary out=summary2;
  by nobs;
  var _all_;
run;

data want;
  if _n_=1 then set contents(keep=libname memname rename=(libname=Schema memname=TableName));
  set summary2 (firstobs=2 rename=(col1=NonNullCount nobs=TotalCount ));
  rename _name_=ColumnName;
  ColumnPosition +1;
  NotNullpercentage = 100*NonNullCount/TotalCount;
run;
proc print;
run;

Results:

                                                                 Non
                                  Total                          Null      Column           Not
Obs    Schema      TableName      Count    ColumnName           Count     Position    Nullpercentage

  1    SASHELP    DEMOGRAPHICS     197     CONT                  197          1           100.000
  2    SASHELP    DEMOGRAPHICS     197     ID                    197          2           100.000
  3    SASHELP    DEMOGRAPHICS     197     ISO                   197          3           100.000
  4    SASHELP    DEMOGRAPHICS     197     NAME                  197          4           100.000
  5    SASHELP    DEMOGRAPHICS     197     ISONAME               197          5           100.000
  6    SASHELP    DEMOGRAPHICS     197     region                197          6           100.000
  7    SASHELP    DEMOGRAPHICS     197     pop                   197          7           100.000
  8    SASHELP    DEMOGRAPHICS     197     popAGR                197          8           100.000
  9    SASHELP    DEMOGRAPHICS     197     popUrban              197          9           100.000
 10    SASHELP    DEMOGRAPHICS     197     totalFR               197         10           100.000
 11    SASHELP    DEMOGRAPHICS     197     AdolescentFPpct       123         11            62.437
 12    SASHELP    DEMOGRAPHICS     197     AdolescentFPyear      123         12            62.437
 13    SASHELP    DEMOGRAPHICS     197     AdultLiteracypct      134         13            68.020
 14    SASHELP    DEMOGRAPHICS     197     MaleSchoolpct         166         14            84.264
 15    SASHELP    DEMOGRAPHICS     197     FemaleSchoolpct       166         15            84.264
 16    SASHELP    DEMOGRAPHICS     197     GNI                   170         16            86.294
 17    SASHELP    DEMOGRAPHICS     197     PopPovertypct          52         17            26.396
 18    SASHELP    DEMOGRAPHICS     197     PopPovertyYear         70         18            35.533

Which you could get to work for a table in your remote database by just pointing a libref at the database using a LIBNAME statement. So if you made a libref in SAS named EMR pointing to the EMR schema in your database.  Then in my SAS code you just replace SASHELP.DEMOGRAPHICS with EMR.eMR_Assessment.

 

 

View solution in original post

5 REPLIES 5
SASKiwi
PROC Star

Each EXECUTE step is by default a separate SQL session. You declare @SQL in one session but refer to it in another where it is not declared. Either put all of your SQL in one EXECUTE statement or create a shared SQL session across all of your EXECUTE statements:

connect to odbc(dsn=ambo) connection = global;
Patrick
Opal | Level 21

Another way is to develop everything in SQL Developer/Toad and then in the end just "wrap" a SAS Execute block around it.

Here a modified sample from real code.

libname blah oracle .....;

proc sql ;
  connect using blah as con1;

  execute
    (
      BEGIN
         EXECUTE IMMEDIATE %str(%')truncate table <schema>.<table> drop storage%str(%'); 
      EXCEPTION
         WHEN OTHERS THEN
            IF SQLCODE != -942 THEN
               RAISE;
            END IF;  
         EXECUTE IMMEDIATE 
          %str(%')
            CREATE TABLE <schema>.<table>
              (  
                "PARTY_RK" NUMBER(15,0) NOT NULL ENABLE, 
                "VALID_FROM_DTTM" TIMESTAMP (6), 
                "VALID_TO_DTTM" TIMESTAMP (6), 
                "PARTY_ID" VARCHAR2(64 CHAR) NOT NULL ENABLE, 
                "SOURCE_SYSTEM_CD" VARCHAR2(10 CHAR) NOT NULL ENABLE, 
                "PARTY_TYPE_CD" VARCHAR2(32 CHAR), 
                "PARTY_CATEGORY_CD" VARCHAR2(32 CHAR), 
                "PARTY_SUBCATEGORY_CD" VARCHAR2(32 CHAR), 
                "IDENTICAL_PARTY_LINK_SK" NUMBER(10,0), 
                "INDIVIDUAL_FLG" CHAR(1 CHAR) NOT NULL ENABLE, 
                "PARTY_FULL_NM" VARCHAR2(200 CHAR), 
                "NATIONAL_ID" VARCHAR2(32 CHAR), 
                "NATIONAL_ID_TYPE_CD" VARCHAR2(10 CHAR), 
                "UI_DEF_FILE_NM" VARCHAR2(100 CHAR), 
                "CREATE_USER_ID" VARCHAR2(60 CHAR), 
                "CREATE_DTTM" TIMESTAMP (6) NOT NULL ENABLE, 
                "UPDATE_USER_ID" VARCHAR2(60 CHAR), 
                "VERSION_NO" NUMBER(10,0) NOT NULL ENABLE, 
                "DELETE_FLG" CHAR(1 CHAR) NOT NULL ENABLE,
                "PARTY_CONFIG_SEQ_NO" NUMBER(10.0) NOT NULL ENABLE,
                "LOAD_TYPE" CHAR(1 CHAR)
              )
          %str(%'); 
         EXECUTE IMMEDIATE 
          %str(%')
            create unique index <schema>.<table>._idx1 
              on <schema>.<table> 
                (party_rk, version_no)
          %str(%');
         EXECUTE IMMEDIATE 
          %str(%')
            create unique index <schema>.<table>._idx2 
              on <schema>.<table> 
                (PARTY_ID, SOURCE_SYSTEM_CD)
          %str(%');
      END;
    )
    by con1;
quit;

Above approach should work for what you've posted except for the last SELECT statement where you want the data/report back into the SAS environment. Here the code could look similar to below:

proc sql;
  connect using blah as con1;
  select * from connection to con1 
    (
      SELECT *
      FROM EMR.eMR_Assessment_dchek
    );
quit;

 

sas_learnsups
Obsidian | Level 7

Thanks but connection=global isn't working for me though now

I am getting error at quotename function. 

ERROR: CLI execute error: [Microsoft][SQL Server Native Client 11.0][SQL Server]Incorrect syntax near '<schema_name>'. 

 

Sorry but could you help me understand what this statement does:

SELECT @SQL += 'SELECT '''+TABLE_NAME+''' AS TableName , '''+COLUMN_NAME+''' AS ColumnName, '''+CONVERT(VARCHAR(5),ORDINAL_POSITION)+''' AS ColumnPosition,
SUM(CASE WHEN '+COLUMN_NAME+' IS NULL THEN 1 ELSE 0 END) CountNulls , COUNT(' +COLUMN_NAME+') CountnonNulls, count(*) TotalCount,
(cast(COUNT(' +COLUMN_NAME+') as decimal (20,2))/ cast(count(*) as decimal (20,2)))*100 NotNullpercentage
FROM '+QUOTENAME(TABLE_SCHEMA)+'.'+QUOTENAME(TABLE_NAME)+';'+ CHAR(10)
FROM INFORMATION_SCHEMA.COLUMNS
WHERE Table_Schema = 'EMR'
AND Table_name = 'eMR_Main'

 

I really want this bit of query to run on SAS as in SQL server.

 

Thanks,

S

 

 

 

Tom
Super User Tom
Super User

It looks like that complex code is just trying to generate code from data.

Do you know what code it is trying to generate?

Do you know what data it is using to generate the code?
Do you have access to the data it is using to generate the code?

If you can answer those then you use SAS to generate the code instead and your process will be much easier.

 

Let's see if we can translate that SQL server dialect into normal code.

First it appears to be setting two constants and creating a place to store the code:

DECLARE @Schema NVARCHAR(100) = 'EMR'
DECLARE @Table NVARCHAR(100) = 'eMR_Assessment'
DECLARE @SQL NVARCHAR(MAX) =''

So in SAS you might use macro variables for that. So something like:

%let Schema= 'EMR' ;
%let Table= 'eMR_Assessment' ;
%let SQL=;

Then it seems to be querying this table:

FROM INFORMATION_SCHEMA.COLUMNS
WHERE TABLE_SCHEMA = @Schema
AND TABLE_NAME = @table

Now lets see if we can figure out what code it is trying to generate from that data.

SELECT @SQL += 
'SELECT '''
+TABLE_NAME
+''' AS TableName , '''
+COLUMN_NAME
+''' AS ColumnName, '''
+CONVERT(VARCHAR(5),ORDINAL_POSITION)
+''' AS ColumnPosition,SUM(CASE WHEN '
+COLUMN_NAME
+' IS NULL THEN 1 ELSE 0 END) CountNulls , COUNT(' 
+COLUMN_NAME
+') CountnonNulls, count(*) TotalCount,(cast(COUNT(' 
+COLUMN_NAME
+') as decimal (20,2))/ cast(count(*) as decimal (20,2)))*100 NotNullpercentage FROM '
+QUOTENAME(TABLE_SCHEMA)
+'.'
+QUOTENAME(TABLE_NAME)
+';'
+ CHAR(10)

Looks like it is trying to generate a series of SELECT statements separated by semi-colon and linefeed.

Looks like it is expecting to find variables named: 

TABLE_NAME
COLUMN_NAME
ORDINAL_POSITION
TABLE_SCHEMA

In that INFORMATION_SCHEMA.COLUMNS table.

 

Based on the names of the resulting columns it appears that it is trying to generate code to process every variable in a table and figure out how often the value is missing. 

 

You could easily do that in SAS.  For example here is one way.

Get the list of variables. Use it to generate some SQL code to find the counts you need. Transpose it to get it from one observation for the dataset to one observation per variable. Calculate the percentage.

proc contents data=sashelp.demographics noprint out=contents; run;
proc sort; by varnum; run;
filename code temp;
data _null_ ;
 file code ;
 if _n_=1 then put 'create table summary as select count(*) as nobs' ;
 set contents end=eof;
 put ',count(' name ') as ' name ;
 if eof then put 'from ' libname +(-1) '.' memname ';' ;
run;

proc sql;
%include code / source2;
quit;

proc transpose data=summary out=summary2;
  by nobs;
  var _all_;
run;

data want;
  if _n_=1 then set contents(keep=libname memname rename=(libname=Schema memname=TableName));
  set summary2 (firstobs=2 rename=(col1=NonNullCount nobs=TotalCount ));
  rename _name_=ColumnName;
  ColumnPosition +1;
  NotNullpercentage = 100*NonNullCount/TotalCount;
run;
proc print;
run;

Results:

                                                                 Non
                                  Total                          Null      Column           Not
Obs    Schema      TableName      Count    ColumnName           Count     Position    Nullpercentage

  1    SASHELP    DEMOGRAPHICS     197     CONT                  197          1           100.000
  2    SASHELP    DEMOGRAPHICS     197     ID                    197          2           100.000
  3    SASHELP    DEMOGRAPHICS     197     ISO                   197          3           100.000
  4    SASHELP    DEMOGRAPHICS     197     NAME                  197          4           100.000
  5    SASHELP    DEMOGRAPHICS     197     ISONAME               197          5           100.000
  6    SASHELP    DEMOGRAPHICS     197     region                197          6           100.000
  7    SASHELP    DEMOGRAPHICS     197     pop                   197          7           100.000
  8    SASHELP    DEMOGRAPHICS     197     popAGR                197          8           100.000
  9    SASHELP    DEMOGRAPHICS     197     popUrban              197          9           100.000
 10    SASHELP    DEMOGRAPHICS     197     totalFR               197         10           100.000
 11    SASHELP    DEMOGRAPHICS     197     AdolescentFPpct       123         11            62.437
 12    SASHELP    DEMOGRAPHICS     197     AdolescentFPyear      123         12            62.437
 13    SASHELP    DEMOGRAPHICS     197     AdultLiteracypct      134         13            68.020
 14    SASHELP    DEMOGRAPHICS     197     MaleSchoolpct         166         14            84.264
 15    SASHELP    DEMOGRAPHICS     197     FemaleSchoolpct       166         15            84.264
 16    SASHELP    DEMOGRAPHICS     197     GNI                   170         16            86.294
 17    SASHELP    DEMOGRAPHICS     197     PopPovertypct          52         17            26.396
 18    SASHELP    DEMOGRAPHICS     197     PopPovertyYear         70         18            35.533

Which you could get to work for a table in your remote database by just pointing a libref at the database using a LIBNAME statement. So if you made a libref in SAS named EMR pointing to the EMR schema in your database.  Then in my SAS code you just replace SASHELP.DEMOGRAPHICS with EMR.eMR_Assessment.

 

 

sas_learnsups
Obsidian | Level 7
Thank you very much! This worked just fine for me. Appreciate it

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