topic Re: Create new variable with value of last available follow-up from another variable in SAS Programming

Create new variable with value of last available follow-up from another variable

JJG — Sun, 18 Feb 2024 23:23:07 GMT

Hello everyone,

I have a dataset with subjects (ID) that have the same number of follow-ups (Follow-up) with a result in a test (Test with 0 being negative and 1 being positive).

I want to create a new variable (Test_Positive) with last available follow-up in Test variable. I want the Test_Positive variable to have all follow-ups as 0 or 1 according to last available Test value. The simulation below may be more informative.

Please see below:

HAVE:

ID	Follow-up	Test
1	1	0
1	2	.
1	3	1
1	4	1
2	1	0
2	2	0
2	3	0
2	4	0
3	1	1
3	2	1
3	3	.
3	4	.

WANT:

ID	Follow-up	Test	Test_Positive
1	1	0	1
1	2	.	1
1	3	1	1
1	4	1	1
2	1	0	0
2	2	0	0
2	3	0	0
2	4	0	0
3	1	1	1
3	2	1	1
3	3	.	1
3	4	.	1

I have tried the following code without success (see output at after code):

proc sort data = have;
by Follow-up;
run;

data want;
set have;
by Follow-up;
Test_Positive = . ;
if last.Test then Test_Positive = last.Test;
if last.Test = . then Test_Positive = .;
else Test_Positive = coalesce(Test,Test_Positive);
retain Test_Positive;
run;

OUTPUT (the error is in 2 first rows where Test_Positive should be 1):

ID	Follow-up	Test	Test_Positive
1	1	0	0
1	2	.	0
1	3	1	1
1	4	1	1
2	1	0	0
2	2	0	0
2	3	0	0
2	4	0	0
3	1	1	1
3	2	1	1
3	3	.	1
3	4	.	1

Thank you very much for any help!

JJG

Re: Create new variable with value of last available follow-up from another variable

mkeintz — Mon, 19 Feb 2024 03:28:16 GMT

You need to pass through each ID twice. In the firstpass find the test_positive value. In the secondpass keep that value and output:

data have;
 input ID	Followup	Test;
datalines;
1	1	0
1	2	.
1	3	1
1	4	1
2	1	0
2	2	0
2	3	0
2	4	0
3	1	1
3	2	1
3	3	.
3	4	.
run;

data want;
  set have (in=firstpass)
      have (in=secondpass) ;
  by id;
  retain test_positive;
  if first.id then test_positive=.;
  if firstpass=1 then test_positive=coalesce(test,test_positive);
  if secondpass=1;
run;

Re: Create new variable with value of last available follow-up from another variable

JJG — Mon, 19 Feb 2024 22:32:08 GMT

That worked out beautifully!

Much appreciated mkeintz!