topic Re: Subset a dataset by value in SAS Programming

Subset a dataset by value

zimcom — Fri, 03 Jul 2020 20:04:55 GMT

Have

Subject ID	Visit	Score
117961	Visit1	0
117961	Visit2	8
117961	Visit3	4
117961	Visit4	1
117961	Visit5	1
117962	Visit1	0
117962	Visit2	6
117962	Visit3	4
117962	Visit4	9
117962	Visit5	2
117963	Visit1	0
117963	Visit2	4
117963	Visit3	2
117963	Visit4	5
117963	Visit5	3
117964	Visit1	0
117964	Visit2	3
117964	Visit3	2
117964	Visit4	8
117964	Visit5	6

want

Subject ID	Visit	Score
117962	Visit1	0
117962	Visit2	6
117962	Visit3	4
117962	Visit4	9
117962	Visit5	2
117964	Visit1	0
117964	Visit2	3
117964	Visit3	2
117964	Visit4	8
117964	Visit5	6

I want to have a subset of data by comparing the score of Visit 2 onward (I don't need to include Visit 1, since Visit 1 is baseline), where the difference between 2 cosecutive scores jump by greater than 4 points.

Thanks as always!!

Re: Subset a dataset by value

Reeza — Fri, 03 Jul 2020 20:49:06 GMT

So you want the highlighted records only?

Re: Subset a dataset by value

zimcom — Fri, 03 Jul 2020 20:58:17 GMT

I want every records of those subject(s) who has a jump of score greater than 4

Re: Subset a dataset by value

Shmuel — Fri, 03 Jul 2020 20:58:57 GMT

Why did you not include subject_id=117961 visit=visit2 sore=0 in the wanted results

where the difference to previous visit is 8-0=8 which is greater then 4 ?

and why you did include subject_id=117962 visit=visit3 score=4 where the difference to

previous visit is -2 which is less then 4 ?

Try next code:

data want;
set have;
  by subject_ID;
      if not first.subject_ID and dif(score) ge 4 then output;
run;

Re: Subset a dataset by value

Reeza — Fri, 03 Jul 2020 21:04:32 GMT

Yes, but do you want both of those records, the first or the last? What happens if it's consecutive?

Re: Subset a dataset by value

zimcom — Fri, 03 Jul 2020 21:05:43 GMT

Why did you not include subject_id=117961 visit=visit2 sore=0 in the wanted results
where the difference to previous visit is 8-0=8 which is greater then 4 ?
[Because the Visit1 is baseline and I only want the jump from Visit 2 and onward.]

and why you did include subject_id=117962 visit=visit3 score=4 where the difference to
previous visit is -2 which is less then 4 ?
[I am only interested in the increase, not the decrease. the difference is more than 4 from the previous one ]

Re: Subset a dataset by value

zimcom — Fri, 03 Jul 2020 21:10:31 GMT

I want all the records of those subjects who has a jump of more than 4 from the previous visit

Re: Subset a dataset by value

Tom — Fri, 03 Jul 2020 21:23:51 GMT

You need to make two passes through the data. One to identify the subjects. One to select the data for those subjects.

You could use a method that goes by the name DOW loop. Or double-DOW loop.

data want ;
  do until (last.subjectid);
    set have;
    by subjectid vist;
    if dif(score) > 4 and not first.subjectid then found=1;
  end;
  do until(last.subjectid);
    set have;
    by subjectid;
    if found then output;
  end;
run;

Re: Subset a dataset by value

Shmuel — Sat, 04 Jul 2020 01:33:47 GMT

Within all subjects the first visit is "Visit1" so using "not first.subject_ID" omits it;

you asked for: "I don't need to include Visit 1, since Visit 1 is baseline" then why is

subject=117962 visit=visit1 score=0 is in the wanted output? and why

subject=117964 visit=visit1 score=0 is in the wanted output?

You posted as wanted output observations which do not fit your specifications.

Re: Subset a dataset by value

zimcom — Sat, 04 Jul 2020 12:01:55 GMT

you asked for: "I don't need to include Visit 1, since Visit 1 is baseline" then why is

subject=117962 visit=visit1 score=0 is in the wanted output? and why

subject=117964 visit=visit1 score=0 is in the wanted output?

I am really sorry fo rthe confusion. In the wanted output, I want records by "Subject", which means I want ALL the records of "those Subjects" whose 2 consective visits scores jumped gretaer than 4 points, when I do the comparsion, I don't need to consider the jump between the Visit 1 and Visit 2, I only need to consider the jump (increase) between visit 2 to visit 3, visit 3 to visit 4, and visit 4 to visit 5, when I find that subject, I wnat all his(her) records in the output dataset. I hope it is clear now.

Re: Subset a dataset by value

Shmuel — Sat, 04 Jul 2020 12:38:35 GMT

Asking for:

" I want records by "Subject", which means I want ALL the records of "those Subjects" whose 2 consective visits scores jumped gretaer than 4 points, when I do the comparsion, I don't need to consider the jump between the Visit 1 and Visit 2, I only need to consider the jump (increase) between visit 2 to visit 3, visit 3 to visit 4, and visit 4 to visit 5, when I find that subject, I wnat all his(her) records in the output dataset." - try next code:

data subjects(keep=subject_ID);
set have;
  by subject_ID;
      if not first.subject_ID and dif(score) ge 4 then output;
run;
proc sql;
   create table want as
   select * from have 
   where subject_ID in 
      (select distinct subject_ID form subjects)
; quit;

In case of any issue please post the log and describe the issue you have.

Pay attention:

- DIF function computes the difference between current and previous value of a variable.