topic Re: How do I use a SAS macro to merge and then concatenate multiple datasets? in SAS Programming

How do I use a SAS macro to merge and then concatenate multiple datasets?

lousam — Thu, 15 Nov 2018 22:52:39 GMT

Hi,

I am working with multiple data sets. There are a total of 4 data sets per year (~250 variables total across all 4 datasets and I have to keep all of them),and I have 10 years of data.

I need help coming up with a macro to minimize the code I have to write.

Here is a list of the 4 data sets for year 2000 (I have 4 data sets each for years 2000-2015):

*List of data sets for year 2000;

clin_2000_phys_exam

clin_2000_lab

clin_2000_group

clin_2000_final

*List of data sets for year 2001;

clin_2001_phys_exam

clin_2001_lab

clin_2001_group

clin_2001_final

......and this repeats until we reach year 2010

What I am trying to do is something like this for each year:

*Merging "clin_2000_phys_exam" data with "clin_2000_lab" data by form;

proc sort data=clin_2000_phys_exam; by form; run;

proc sort data=clin_2000_lab; by form; run;

data phys_lab_2000;

merge clin_2000_phys_exam clin_2000_lab;

by form;

run;

*Merging the newly created "phys_lab_2000" data with "clin_2000_group" and "clin_2000_final" data by ID;

proc sort data=phys_lab_2000; by ID; run;

proc sort data=clin_2000_group; by ID; run;

proc sort data=clin_2000_final; by ID; run;

data 2000_final data;

merge phys_lab_2000 clin_2000_group clin_2000_final;

by ID;

run;

*Repeat the code above for all 10 years (years 2000-2010) until each year has a merged final dataset;

*Concatenate data together to create a long dataset that contains data for all 10 years;

data year200_year2011;

set 2000_final data

2001_final data

2002_final data

2003_final data

2004_final data

2005_final data

2006_final data

2007_final data

2008_final data

2009_final data

20010_final data;

run;

I need help coming up with a SAS macro that does this so that I don't have to rewrite the same line of code for each year since the only difference would be the name of the dataset.

I appreciate any help you can provide.

Re: How do I use a SAS macro to merge and then concatenate multiple datasets?

Astounding — Thu, 15 Nov 2018 23:17:24 GMT

It looks like you know precisely what code needs to run for each year. Here's an example of turning it into a macro. I'll start with a piece of the code you supplied:

proc sort data=phys_lab_2000; by ID; run;

proc sort data=clin_2000_group; by ID; run;

proc sort data=clin_2000_final; by ID; run;

data 2000_final data;

merge phys_lab_2000 clin_2000_group clin_2000_final;

by ID;

run;

You might want to add to that code, since you have indicated that more processing does take place for each year. Turning it into a macro that processes one year would look like this. It's as simple as replacing "2000" with "&year.":

%macro one_year (year=);

proc sort data=phys_lab_&year.; by ID; run;

proc sort data=clin_&year._group; by ID; run;

proc sort data=clin_&year._final; by ID; run;

data &year._final data;

merge phys_lab_&year. clin_&year._group clin_&year._final;

by ID;

run;

%mend one_year;

Then actually executing the code looks like this:

%one_year (year=2000)

%one_year (year=2001)

etc.

Note that you will need to change the names of one of your data sets. Data set names cannot begin with a number, so this would be an invalid name:

2000_final data

Re: How do I use a SAS macro to merge and then concatenate multiple datasets?

Junyong — Thu, 15 Nov 2018 23:26:30 GMT

Though I don't have your data, hope this helps.

/*A sample dataset that mimics the shape of your dataset*/

%macro repeat1;

%do repeat=2000 %to 2010;

data clin_&repeat._phys_exam clin_&repeat._lab(drop=id) clin_&repeat._group(drop=form) clin_&repeat._final(drop=form);
	do form=1,2;
		do id=1,2;
			output clin_&repeat._phys_exam;
			if id=1 then output clin_&repeat._lab;
			if form=1 then output clin_&repeat._group;
			if form=1 then output clin_&repeat._final;
		end;
	end;
run;

%end;

%mend;

%repeat1;

/*The code that does what you need*/

%macro repeat2;

%do repeat=2000 %to 2010;

proc sort data=clin_&repeat._phys_exam;
	by form;
run;

proc sort data=clin_&repeat._lab;
	by form;
run;

data phys_lab_&repeat.;
	merge clin_&repeat._phys_exam clin_&repeat._lab;
	by form;
run;

proc sort data=phys_lab_&repeat.;
	by id;
run;

proc sort data=clin_&repeat._group;
	by id;
run;

proc sort data=clin_&repeat._final;
	by id;
run;

data phys_lab_&repeat.;
	merge phys_lab_&repeat. clin_&repeat._group clin_&repeat._final;
	by id;
run;

proc append base=year2000_year2010 data=phys_lab_&repeat.;
run;

%end;

%mend;

%repeat2;

Though this may not be the best solution, this may do something you mentioned.

Re: How do I use a SAS macro to merge and then concatenate multiple datasets?

Reeza — Fri, 16 Nov 2018 15:58:39 GMT

Here's a quick tutorial on turning working code into a macro, which is what you want to do here:

https://github.com/statgeek/SAS-Tutorials/blob/master/Turning%20a%20program%20into%20a%20macro.md