topic Selecting earliest/latest date for t-test in SAS Programming

Selecting earliest/latest date for t-test

iressa131 — Fri, 01 Jun 2018 20:19:31 GMT

Hello,

I have data points collected at 3 dates (in SAS format) for each patient and need to select the first and third in order to find averages for the data point and perform a ttest. How would I do this?

I came across a similar question and saw people suggest a method using proc sql but will this just give me an output listing what the first/third dates are or will it reorganize the dataset? My instructor told me I need to create 2 files and merge them so do I create a file for the first date then one for the third and then merge them? Thanks for any help!

Here is a sample and as you can see, the dates are not ordered.

ID	ML	SF	date
1	37	39	4/5/2013
1	24	29	2/26/2015
1	22	36	12/15/2012
3	68	100	12/31/2010
3	76	88	7/24/2013
3	68	86	12/17/2015
4	70	95	6/20/2013
4	71	95	4/14/2016
4	40	95	6/21/2011

Re: Selecting earliest/latest date for t-test

SuryaKiran — Fri, 01 Jun 2018 19:45:50 GMT

Do you want to calculate the average value between first and third records? Then check this

data have;
input date mmddyy10. val;
datalines;
05/28/2018 10
05/29/2018 20
05/30/2018 30
;
run;

data want;
merge have have(keep=val firstobs=2 rename=(val=Val_));
lag_val=Lag(Val);
Avg=Val_+Lag_val/2;
run;

Re: Selecting earliest/latest date for t-test

Reeza — Fri, 01 Jun 2018 20:05:46 GMT

It depends on how your data is structured. For example, is it structured so that those 3 dates are all in one row or multiple rows. Please post some sample data, fake is fine, just needs to reflect your data structure.

Re: Selecting earliest/latest date for t-test

iressa131 — Fri, 01 Jun 2018 20:20:06 GMT

Sorry! I uploaded a sample just now

Re: Selecting earliest/latest date for t-test

Reeza — Fri, 01 Jun 2018 20:31:03 GMT

There are always more than one way to accomplish things.

1. Sort by ID
2. Use BY processing and FIRST/LAST to get the first and last record (or third).
3. Depends on what statistics you're wanting. If you provide that remaining detail we can help direct you on that stage as well.

Re: Selecting earliest/latest date for t-test

iressa131 — Fri, 01 Jun 2018 23:06:47 GMT

so even though the date arent in order SAS will identify first and last correctly? I'm looking to get the means for all variables at the first and third time point and compare the first and third SF score by way of a paired t test.

Re: Selecting earliest/latest date for t-test

PaigeMiller — Fri, 01 Jun 2018 23:25:28 GMT

Sort by ID and DATE before you do the analysis.

Re: Selecting earliest/latest date for t-test

Reeza — Sat, 02 Jun 2018 01:22:10 GMT

Ordering of data is trivial, the main issue is understanding what format PROC TTEST would like for the data.

For a two sample t-test its a long format, for a paired t-test you need them separate or take the difference and use a single t-test on the difference.

You don't explain the 'averages' part and not sure how that relates to a t-test either. Here's an example to help you get started.

data have;
informat date mmddyy10.;
input ID  ML  SF  date;
cards;
1   37  39  4/5/2013
1   24  29  2/26/2015
1   22  36  12/15/2012
3   68  100 12/31/2010
3   76  88  7/24/2013
3   68  86  12/17/2015
4   70  95  6/20/2013
4   71  95  4/14/2016
4   40  95  6/21/2011
;
run;

proc sort data=have; 
by id date;
run;

data filtered;
set have;
by id date;
if first.id or last.id then do;
if first.id then count=1; else count=2;output;
end;

run;

proc ttest data=filtered;
class count;
var ml sf;
run;